All modules for which code is available

• doctest
• nipy.algorithms.clustering.bgmm
• nipy.algorithms.clustering.ggmixture
• nipy.algorithms.clustering.gmm
• nipy.algorithms.clustering.hierarchical_clustering
• nipy.algorithms.clustering.imm
• nipy.algorithms.clustering.utils
• nipy.algorithms.clustering.von_mises_fisher_mixture
• nipy.algorithms.diagnostics.commands
• nipy.algorithms.diagnostics.screens
• nipy.algorithms.diagnostics.timediff
• nipy.algorithms.diagnostics.tsdiffplot
• nipy.algorithms.fwhm
• nipy.algorithms.graph.bipartite_graph
• nipy.algorithms.graph.field
• nipy.algorithms.graph.forest
• nipy.algorithms.graph.graph
• nipy.algorithms.group.parcel_analysis
• nipy.algorithms.interpolation
• nipy.algorithms.kernel_smooth
• nipy.algorithms.optimize
• nipy.algorithms.registration.affine
• nipy.algorithms.registration.chain_transform
• nipy.algorithms.registration.groupwise_registration
• nipy.algorithms.registration.histogram_registration
• nipy.algorithms.registration.optimizer
• nipy.algorithms.registration.polyaffine
• nipy.algorithms.registration.resample
• nipy.algorithms.registration.scripting
• nipy.algorithms.registration.similarity_measures
• nipy.algorithms.registration.transform
• nipy.algorithms.registration.type_check
• nipy.algorithms.resample
• nipy.algorithms.segmentation.brain_segmentation
• nipy.algorithms.segmentation.segmentation
• nipy.algorithms.slicetiming.timefuncs
• nipy.algorithms.statistics.bayesian_mixed_effects
• nipy.algorithms.statistics.bench.bench_intvol
• nipy.algorithms.statistics.empirical_pvalue
• nipy.algorithms.statistics.formula.formulae
• nipy.algorithms.statistics.mixed_effects_stat
• nipy.algorithms.statistics.models.family.family
• nipy.algorithms.statistics.models.family.links
• nipy.algorithms.statistics.models.family.varfuncs
• nipy.algorithms.statistics.models.glm
• nipy.algorithms.statistics.models.model
• nipy.algorithms.statistics.models.nlsmodel
• nipy.algorithms.statistics.models.regression
• nipy.algorithms.statistics.models.setupscons
• nipy.algorithms.statistics.models.utils
• nipy.algorithms.statistics.onesample
• nipy.algorithms.statistics.rft
• nipy.algorithms.statistics.utils
• nipy.algorithms.utils.fast_distance
• nipy.algorithms.utils.matrices
• nipy.algorithms.utils.pca
• nipy.core.image.image
• nipy.core.image.image_list
• nipy.core.image.image_spaces
• nipy.core.reference.array_coords
• nipy.core.reference.coordinate_map
• nipy.core.reference.coordinate_system
• nipy.core.reference.slices
• nipy.core.reference.spaces
• nipy.core.utils.generators
• nipy.fixes.numpy.testing.noseclasses
• nipy.fixes.numpy.testing.nosetester
• nipy.interfaces.matlab
• nipy.interfaces.spm
• nipy.io.files
• nipy.io.nibcompat
• nipy.io.nifti_ref
• nipy.labs.bindings.benchmarks.bench_numpy
• nipy.labs.datasets.converters
• nipy.labs.datasets.transforms.affine_transform
• nipy.labs.datasets.transforms.affine_utils
• nipy.labs.datasets.transforms.transform
• nipy.labs.datasets.volumes.volume_data
• nipy.labs.datasets.volumes.volume_field
• nipy.labs.datasets.volumes.volume_grid
• nipy.labs.datasets.volumes.volume_img
• nipy.labs.glm.benchmarks.bench_glm
• nipy.labs.glm.glm
• nipy.labs.group.permutation_test
• nipy.labs.mask
• nipy.labs.spatial_models.bayesian_structural_analysis
• nipy.labs.spatial_models.bsa_io
• nipy.labs.spatial_models.discrete_domain
• nipy.labs.spatial_models.hierarchical_parcellation
• nipy.labs.spatial_models.hroi
• nipy.labs.spatial_models.mroi
• nipy.labs.spatial_models.parcel_io
• nipy.labs.spatial_models.parcellation
• nipy.labs.spatial_models.structural_bfls
• nipy.labs.statistical_mapping
• nipy.labs.utils.reproducibility_measures
• nipy.labs.utils.simul_multisubject_fmri_dataset
• nipy.labs.utils.zscore
• nipy.labs.viz_tools.activation_maps
• nipy.labs.viz_tools.anat_cache
• nipy.labs.viz_tools.cm
• nipy.labs.viz_tools.coord_tools
• nipy.labs.viz_tools.maps_3d
• nipy.labs.viz_tools.slicers
• nipy.labs.viz_tools.test.test_activation_maps
• nipy.labs.viz_tools.test.test_cm
• nipy.labs.viz_tools.test.test_coord_tools
• nipy.labs.viz_tools.test.test_edge_detect
• nipy.labs.viz_tools.test.test_slicers
• nipy.modalities.fmri.design
• nipy.modalities.fmri.design_matrix
• nipy.modalities.fmri.experimental_paradigm
• nipy.modalities.fmri.fmri
• nipy.modalities.fmri.fmristat.hrf
• nipy.modalities.fmri.fmristat.invert
• nipy.modalities.fmri.fmristat.model
• nipy.modalities.fmri.fmristat.outputters
• nipy.modalities.fmri.glm
• nipy.modalities.fmri.hemodynamic_models
• nipy.modalities.fmri.hrf
• nipy.modalities.fmri.realfuncs
• nipy.modalities.fmri.spm.correlation
• nipy.modalities.fmri.spm.model
• nipy.modalities.fmri.spm.reml
• nipy.modalities.fmri.spm.trace
• nipy.modalities.fmri.utils
• nipy.pkg_info
• nipy.testing
• nipy.testing.decorators
• nipy.testing.doctester
• nipy.testing.nosetester
• nipy.utils
• nipy.utils.arrays
• nipy.utils.compat3
• nipy.utils.perlpie
• nipy.utils.skip_test
• nipy.utils.utilities
• nose.plugins.base
• nose.plugins.doctests
• numpy
• numpy.lib.polynomial
• numpy.lib.utils
• regreg.problems.composite
• regreg.smooth
• scipy.interpolate.interpolate
• selectinf.algorithms.change_point
• selectinf.algorithms.covtest
• selectinf.algorithms.cv
• selectinf.algorithms.cv_glmnet
• selectinf.algorithms.debiased_lasso
• selectinf.algorithms.forward_step
• selectinf.algorithms.lasso
• selectinf.algorithms.pca
• selectinf.algorithms.screening
• selectinf.algorithms.softmax
• selectinf.algorithms.sqrt_lasso
• selectinf.algorithms.stopping_rules
• selectinf.base
• selectinf.constraints.affine
• selectinf.constraints.base
• selectinf.constraints.estimation
• selectinf.constraints.intervals
• selectinf.constraints.quadratic
• selectinf.constraints.quasi_affine
• selectinf.distributions.chain
• selectinf.distributions.chisq
• selectinf.distributions.discrete_family
• selectinf.distributions.discrete_multiparameter
• selectinf.distributions.intervals
• selectinf.distributions.pvalue
• selectinf.glm
• selectinf.learning.Rfitters
• selectinf.learning.Rutils
• selectinf.learning.core
• selectinf.learning.fitters
• selectinf.learning.learners
• selectinf.learning.samplers
• selectinf.learning.utils
• selectinf.randomized.cv_view
• selectinf.randomized.group_lasso
• selectinf.randomized.lasso
• selectinf.randomized.modelQ
• selectinf.randomized.query
• selectinf.randomized.randomization
• selectinf.randomized.screening
• selectinf.randomized.slope
• selectinf.sampling.langevin
• selectinf.sampling.sequential
• selectinf.truncated.F
• selectinf.truncated.T
• selectinf.truncated.base
• selectinf.truncated.chi
• selectinf.truncated.gaussian
• selectinf.utils.tools
• sympy.core.assumptions
• sympy.core.basic
• sympy.core.evalf
• sympy.core.expr
• sympy.core.symbol
• sympy.logic.boolalg
• traitlets.traitlets